../../tmp/servers/virsirnadb/1608034196
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2053 | 1 | ttctttcccttctctcgtc | 19 | |
| NC_001653.2 | Hepatitis delta virus, complete genome | 1174 | ................... | 1192 | 100 |
| NC_001653.2 | Hepatitis delta virus, complete genome | 1239 | .........__________ | 1247 | 47 |
| X04451.1 | Hepatitis delta virus (HDV) RNA genome | 1171 | ................... | 1189 | 100 |
| X04451.1 | Hepatitis delta virus (HDV) RNA genome | 1067 | ______...........__ | 1057 | 57 |
| M55042.1 | HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds | 1172 | ................... | 1190 | 100 |
| M55042.1 | HPDAG Hepatitis D virus delta antigen (HDAg) mRNA, complete cds | 1067 | ______...........__ | 1057 | 57 |
| M21012.1 | HPDGEN Hepatitis delta virus RNA, complete genome | 1172 | ................... | 1190 | 100 |
| M21012.1 | HPDGEN Hepatitis delta virus RNA, complete genome | 1067 | ______...........__ | 1057 | 57 |
| M92448.1 | HPDHDAG Hepatitis D virus, 5' end | 1169 | ................... | 1187 | 100 |
| M58629.1 | HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c | 1170 | ................... | 1188 | 100 |
| M58629.1 | HPDHDAGA Hepatitis delta virus large and small antigens (HDAg) gene, c | 1415 | .........__________ | 1423 | 47 |
| L22066.1 | HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav | 1174 | ................... | 1192 | 100 |
| L22066.1 | HPDAGA Hepatitis delta virus antigen gene, complete cds, and autocleav | 989 | _____...........___ | 979 | 57 |
| X85253.1 | Hepatitis D virus complete genome containing delta antigen ORF | 1169 | ................... | 1187 | 100 |
| X85253.1 | Hepatitis D virus complete genome containing delta antigen ORF | 1064 | ______...........__ | 1054 | 57 |
| U81989.1 | HDU81989 Hepatitis delta virus from Ethiopia genotype IC, complete gen | 1172 | ................... | 1190 | 100 |
| U81989.1 | HDU81989 Hepatitis delta virus from Ethiopia genotype IC, complete gen | 190 | ______.........____ | 182 | 47 |
| AJ000558.1 | Hepatitis D Virus complete genome | 1171 | ................... | 1189 | 100 |
| AJ000558.1 | Hepatitis D Virus complete genome | 1066 | ______...........__ | 1056 | 57 |
| AF098261.1 | AF098261 Hepatitis D virus from Canada, complete genome | 1165 | ................... | 1183 | 100 |
| AF098261.1 | AF098261 Hepatitis D virus from Canada, complete genome | 982 | _____...........___ | 972 | 57 |
| AF098261.1 | AF098261 Hepatitis D virus from Canada, complete genome | 1062 | ______...........__ | 1052 | 57 |
| AF104263.1 | Hepatitis D virus strain TW2667, complete genome | 1169 | ................... | 1187 | 100 |
| AF104263.1 | Hepatitis D virus strain TW2667, complete genome | 172 | .........c.________ | 162 | 52 |
| AJ307077.1 | Hepatitis delta virus complete genome, isolate W5 | 1172 | ................... | 1190 | 100 |
| AJ307077.1 | Hepatitis delta virus complete genome, isolate W5 | 1067 | ______...........__ | 1057 | 57 |
| AF425644.1 | Hepatitis D virus isolate TWD2577-66 genotype I, complete genome | 1167 | ................... | 1185 | 100 |
| AF425644.1 | Hepatitis D virus isolate TWD2577-66 genotype I, complete genome | 171 | .........c.________ | 161 | 52 |
| AB088679.1 | Hepatitis delta virus gene for HD antigen, complete cds | 1179 | ................... | 1197 | 100 |
| AB088679.1 | Hepatitis delta virus gene for HD antigen, complete cds | 1077 | ___.c..........a.__ | 1064 | 63 |
| AB118818.1 | Hepatitis delta virus genomic RNA, complete genome, strain:Miyako(JA- | 1173 | ................... | 1191 | 100 |
| AB118818.1 | Hepatitis delta virus genomic RNA, complete genome, strain:Miyako(JA- | 1071 | ___.c..........a.__ | 1058 | 63 |
| AB118818.1 | Hepatitis delta virus genomic RNA, complete genome, strain:Miyako(JA- | 591 | ___.a........._____ | 601 | 52 |
| AB118819.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M3) | 1178 | ................... | 1196 | 100 |
| AB118820.1 | Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) | 1175 | ................... | 1193 | 100 |
| AB118820.1 | Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) | 1073 | ___.c..........a.__ | 1060 | 63 |
| AB118820.1 | Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M4) | 1240 | .........__________ | 1248 | 47 |
| AB118821.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M5) | 1179 | ................... | 1197 | 100 |
| AB118822.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M6) | 1176 | ................... | 1194 | 100 |
| AB118822.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M6) | 1074 | ___.c..........a.__ | 1061 | 63 |
| AB118823.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M7) | 1175 | ................... | 1193 | 100 |
| AB118823.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M7) | 1073 | ___.c..........a.__ | 1060 | 63 |
| AB118824.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M8) | 1177 | ................... | 1195 | 100 |
| AB118824.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M8) | 135 | _____.........a.c.. | 122 | 63 |
| AB118824.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M8) | 1075 | ___.c..........a.__ | 1062 | 63 |
| AB118825.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M10) | 1179 | ................... | 1197 | 100 |
| AB118826.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M11) | 1174 | ................... | 1192 | 100 |
| AB118826.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M11) | 1072 | ___.c..........a.__ | 1059 | 63 |
| AB118827.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M12) | 1173 | ................... | 1191 | 100 |
| AB118827.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M12) | 1073 | _.t.c..........a.__ | 1058 | 68 |
| AB118828.1 | Hepatitis D virus DNA, complete genome, strain:Miyako(JA-M13) | 1173 | ................... | 1191 | 100 |
| AB118829.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M14) | 1176 | ................... | 1194 | 100 |
| AB118830.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M15) | 1176 | ................... | 1194 | 100 |
| AB118831.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M16) | 1175 | ................... | 1193 | 100 |
| AB118831.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M16) | 1073 | ___.c..........a.__ | 1060 | 63 |
| AB118832.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M17) | 1176 | ................... | 1194 | 100 |
| AB118833.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M18) | 1175 | ................... | 1193 | 100 |
| AB118833.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M18) | 1073 | ___.c..........a.__ | 1060 | 63 |
| AB118834.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M19) | 1180 | ................... | 1198 | 100 |
| AB118835.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M20) | 1180 | ................... | 1198 | 100 |
| AB118836.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M44) | 1175 | ................... | 1193 | 100 |
| AB118837.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M23) | 1174 | ................... | 1192 | 100 |
| AB118837.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M23) | 1072 | ___.c..........a.__ | 1059 | 63 |
| AB118838.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M24) | 1177 | ................... | 1195 | 100 |
| AB118838.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M24) | 1075 | ___.c..........a.__ | 1062 | 63 |
| AB118839.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M27) | 1177 | ................... | 1195 | 100 |
| AB118839.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M27) | 1075 | ___.c..........a.__ | 1062 | 63 |
| AB118840.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M29) | 1171 | ................... | 1189 | 100 |
| AB118840.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M29) | 1069 | ___.c..........a.__ | 1056 | 63 |
| AB118841.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M31) | 1174 | ................... | 1192 | 100 |
| AB118842.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M32) | 1176 | ................... | 1194 | 100 |
| AB118843.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M33) | 1174 | ................... | 1192 | 100 |
| AB118844.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M34) | 1174 | ................... | 1192 | 100 |
| AB118844.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M34) | 593 | _____........._____ | 601 | 47 |
| AB118845.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M36) | 1173 | ................... | 1191 | 100 |
| AB118845.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M36) | 593 | _____........._____ | 601 | 47 |
| AB118847.1 | Hepatitis delta virus DNA, complete genome, strain:Tokyo(JA-T) | 1175 | ................... | 1193 | 100 |
| AB118847.1 | Hepatitis delta virus DNA, complete genome, strain:Tokyo(JA-T) | 594 | _____........._____ | 602 | 47 |
| AB118848.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N1) | 1171 | ................... | 1189 | 100 |
| AB118849.1 | Hepatitis delta virus DNA, complete genome, strain:Nagasaki(JA-N2) | 1168 | ................... | 1186 | 100 |
| AJ584846.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-73 | 1185 | ................... | 1203 | 100 |
| AJ584848.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-91 | 1187 | ................... | 1205 | 100 |
| AJ584848.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-91 | 1085 | ___.c........._____ | 1075 | 52 |
| AY648952.1 | Hepatitis delta virus isolate TWD62#16, complete genome | 1175 | ................... | 1193 | 100 |
| AY648952.1 | Hepatitis delta virus isolate TWD62#16, complete genome | 594 | _____........._____ | 602 | 47 |
| AY648953.1 | Hepatitis delta virus isolate 2621#56, complete genome | 1175 | ................... | 1193 | 100 |
| AY648953.1 | Hepatitis delta virus isolate 2621#56, complete genome | 594 | _____........._____ | 602 | 47 |
| AY648954.1 | Hepatitis delta virus isolate TW1025#14, complete genome | 1175 | ................... | 1193 | 100 |
| AY648954.1 | Hepatitis delta virus isolate TW1025#14, complete genome | 594 | _____........._____ | 602 | 47 |
| AY648955.1 | Hepatitis delta virus isolate TW3038#25, complete genome | 1175 | ................... | 1193 | 100 |
| AY648955.1 | Hepatitis delta virus isolate TW3038#25, complete genome | 594 | _____........._____ | 602 | 47 |
| AY648956.1 | Hepatitis delta virus isolate TW1435#47, complete genome | 1168 | ................... | 1186 | 100 |
| AY648957.1 | Hepatitis delta virus isolate TW5132#24, complete genome | 1168 | ................... | 1186 | 100 |
| AY648958.1 | Hepatitis delta virus isolate TW1573#4, complete genome | 1167 | ................... | 1185 | 100 |
| AY648959.1 | Hepatitis delta virus isolate TW3678#25, complete genome | 1167 | ................... | 1185 | 100 |
| AM183327.1 | Hepatitis delta virus complete virion genome, strain dFr2736 | 1172 | ................... | 1190 | 100 |
| AM183330.1 | Hepatitis delta virus complete virion genome, strain dFr2072 | 1172 | ................... | 1190 | 100 |
| AM183330.1 | Hepatitis delta virus complete virion genome, strain dFr2072 | 93 | _____.........gt.._ | 81 | 57 |
| AM779575.1 | Hepatitis delta virus dFr2119 LHD gene for large HD antigen, genomic | 1167 | ................... | 1185 | 100 |
| AM779575.1 | Hepatitis delta virus dFr2119 LHD gene for large HD antigen, genomic | 1062 | ______.........a.a. | 1050 | 57 |
| AM779578.1 | Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic | 1174 | ................... | 1192 | 100 |
| AM779578.1 | Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic | 989 | _____...........___ | 979 | 57 |
| AM779578.1 | Hepatitis delta virus dFr2239b LHD gene for large HD antigen, genomic | 1239 | .........__________ | 1247 | 47 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 1173 | ................... | 1191 | 100 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 988 | _____...........___ | 978 | 57 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 175 | .........c.________ | 165 | 52 |
| AM779579.1 | Hepatitis delta virus dFr2395 LHD gene for large HD antigen, genomic | 1238 | .........__________ | 1246 | 47 |
| AM779581.1 | Hepatitis delta virus dTk1 LHD gene for large HD antigen, genomic RNA | 1170 | ................... | 1188 | 100 |
| AM779582.1 | Hepatitis delta virus dTk35 LHD gene for large HD antigen, genomic RN | 1172 | ................... | 1190 | 100 |
| AM779584.1 | Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA | 1173 | ................... | 1191 | 100 |
| AM779584.1 | Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA | 1522 | ____.........tc..._ | 1535 | 63 |
| AM779584.1 | Hepatitis delta virus dTk4 LHD gene for large HD antigen, genomic RNA | 193 | ______.........____ | 185 | 47 |
| AM779585.1 | Hepatitis delta virus dTk6 LHD gene for large HD antigen, genomic RNA | 1174 | ................... | 1192 | 100 |
| AM779585.1 | Hepatitis delta virus dTk6 LHD gene for large HD antigen, genomic RNA | 191 | ______.........____ | 183 | 47 |
| AM779586.1 | Hepatitis delta virus dTk28 LHD gene for large HD antigen, genomic RN | 1171 | ................... | 1189 | 100 |
| AM779588.1 | Hepatitis delta virus dTk34 LHD gene for large HD antigen, genomic RN | 1170 | ................... | 1188 | 100 |
| AM779588.1 | Hepatitis delta virus dTk34 LHD gene for large HD antigen, genomic RN | 169 | .........c.________ | 159 | 52 |
| AM779589.1 | Hepatitis delta virus dTk3 LHD gene for large HD antigen, genomic RNA | 1172 | ................... | 1190 | 100 |
| AM779592.1 | Hepatitis delta virus dTk8 LHD gene for large HD antigen, genomic RNA | 1168 | ................... | 1186 | 100 |
| AM779592.1 | Hepatitis delta virus dTk8 LHD gene for large HD antigen, genomic RNA | 1063 | ______...........__ | 1053 | 57 |
| AM779594.1 | Hepatitis delta virus dTk27 LHD gene for large HD antigen, genomic RN | 1174 | ................... | 1192 | 100 |
| AM779594.1 | Hepatitis delta virus dTk27 LHD gene for large HD antigen, genomic RN | 1069 | ______...........__ | 1059 | 57 |
| AM779596.1 | Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN | 1174 | ................... | 1192 | 100 |
| AM779596.1 | Hepatitis delta virus dTk21 LHD gene for large HD antigen, genomic RN | 192 | ______.........____ | 184 | 47 |
| AM779597.1 | Hepatitis delta virus dTk2 LHD gene for large HD antigen, genomic RNA | 1174 | ................... | 1192 | 100 |
| AM779597.1 | Hepatitis delta virus dTk2 LHD gene for large HD antigen, genomic RNA | 989 | _____...........___ | 979 | 57 |
| AM902166.1 | Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic | 1169 | ................... | 1187 | 100 |
| AM902166.1 | Hepatitis delta virus dFr2189 LHD gene for large HD antigen, genomic | 984 | _____...........___ | 974 | 57 |
| AM902169.1 | Hepatitis delta virus dFr2236 LHD gene for large HD antigen, genomic | 1175 | ................... | 1193 | 100 |
| AM902169.1 | Hepatitis delta virus dFr2236 LHD gene for large HD antigen, genomic | 194 | __..cc.........____ | 182 | 57 |
| AM902169.1 | Hepatitis delta virus dFr2236 LHD gene for large HD antigen, genomic | 1070 | ______.........a.a. | 1058 | 57 |
| AM902170.1 | Hepatitis delta virus dFr2244 LHD gene for large HD antigen, genomic | 1170 | ................... | 1188 | 100 |
| AM902172.1 | Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic | 1175 | ................... | 1193 | 100 |
| AM902172.1 | Hepatitis delta virus dFr2264 LHD gene for large HD antigen, genomic | 990 | _____...........___ | 980 | 57 |
| AM902173.1 | Hepatitis delta virus dFr2380 LHD gene for large HD antigen, genomic | 1161 | ................... | 1179 | 100 |
| AM902174.1 | Hepatitis delta virus dFr2404 LHD gene for large HD antigen, genomic | 1161 | ................... | 1179 | 100 |
| AM902175.1 | Hepatitis delta virus dFr2406 LHD gene for large HD antigen, genomic | 1174 | ................... | 1192 | 100 |
| AM902177.1 | Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic | 1174 | ................... | 1192 | 100 |
| AM902177.1 | Hepatitis delta virus dFr2012 LHD gene for large HD antigen, genomic | 989 | _____...........___ | 979 | 57 |
| AM902178.1 | Hepatitis delta virus dFr2040 LHD gene for large HD antigen, genomic | 1173 | ................... | 1191 | 100 |
| AM902178.1 | Hepatitis delta virus dFr2040 LHD gene for large HD antigen, genomic | 988 | _____...........___ | 978 | 57 |
| HM046802.1 | Hepatitis delta virus isolate JN, complete genome | 1170 | ................... | 1188 | 100 |
| HM046802.1 | Hepatitis delta virus isolate JN, complete genome | 1065 | ______...........__ | 1055 | 57 |
| HQ005365.1 | Hepatitis delta virus isolate 7, complete genome | 947 | ................... | 965 | 100 |
| HQ005367.1 | Hepatitis delta virus isolate 8, complete genome | 948 | ................... | 966 | 100 |
| HQ005367.1 | Hepatitis delta virus isolate 8, complete genome | 1514 | _____........._____ | 1506 | 47 |
| HQ005367.1 | Hepatitis delta virus isolate 8, complete genome | 1649 | ______.........____ | 1641 | 47 |
| AM779591.1 | Hepatitis delta virus dTk5 LHD gene for large HD antigen, genomic RNA | 1168 | ...........y....... | 1186 | 94 |
| M28267.1 | HPDCG Human hepatitis delta virus encoding delta-antigen RNA, complete | 1175 | ...........t....... | 1193 | 94 |
| M28267.1 | HPDCG Human hepatitis delta virus encoding delta-antigen RNA, complete | 990 | _____...........___ | 980 | 57 |
| M28267.1 | HPDCG Human hepatitis delta virus encoding delta-antigen RNA, complete | 170 | ___........._______ | 162 | 47 |
| AJ584845.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-47 | 1186 | .......t........... | 1204 | 94 |
| AJ584845.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-47 | 1084 | ___.c........._____ | 1074 | 52 |
| AM183332.1 | Hepatitis delta virus complete virion genome, strain dFr2139 | 1169 | ......t............ | 1187 | 94 |
| AM183332.1 | Hepatitis delta virus complete virion genome, strain dFr2139 | 1405 | .c.........________ | 1415 | 52 |
| AM183332.1 | Hepatitis delta virus complete virion genome, strain dFr2139 | 1332 | __.........________ | 1340 | 47 |
| EF514906.1 | Hepatitis delta virus isolate SO, complete genome | 1168 | ..t................ | 1186 | 94 |
| AM779587.1 | Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA | 1173 | ......t............ | 1191 | 94 |
| AM779587.1 | Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA | 988 | _____...........___ | 978 | 57 |
| AM779587.1 | Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA | 1238 | .........__________ | 1246 | 47 |
| AM779587.1 | Hepatitis delta virus dTk7 LHD gene for large HD antigen, genomic RNA | 173 | _........c.tc..a.__ | 158 | 63 |
| AM779595.1 | Hepatitis delta virus dTk12 LHD gene for large HD antigen, genomic RN | 1170 | ...........t....... | 1188 | 94 |
| AM902163.1 | Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic | 1174 | ............c...... | 1192 | 94 |
| AM902163.1 | Hepatitis delta virus dFr2067 LHD gene for large HD antigen, genomic | 989 | _____...........___ | 979 | 57 |
| AM902168.1 | Hepatitis delta virus dFr2045 LHD gene for large HD antigen, genomic | 1166 | ...........t....... | 1184 | 94 |
| AM902168.1 | Hepatitis delta virus dFr2045 LHD gene for large HD antigen, genomic | 981 | _____...........___ | 971 | 57 |
| AM902168.1 | Hepatitis delta virus dFr2045 LHD gene for large HD antigen, genomic | 1547 | .gy.........c.c..__ | 1563 | 68 |
| AM902180.1 | Hepatitis delta virus dFr2043 LHD gene for large HD antigen, genomic | 1172 | ......t............ | 1190 | 94 |
| AM902180.1 | Hepatitis delta virus dFr2043 LHD gene for large HD antigen, genomic | 986 | ______..........___ | 977 | 52 |
| HQ005364.1 | Hepatitis delta virus isolate 5, complete genome | 948 | ...........t....... | 966 | 94 |
| X77627.1 | Hepatitis D virus genomic RNA for HDAg | 1167 | ...........tc...... | 1185 | 89 |
| AM183328.1 | Hepatitis delta virus complete virion genome, strain dFr2703 | 1178 | ...........tc...... | 1196 | 89 |
| AM183328.1 | Hepatitis delta virus complete virion genome, strain dFr2703 | 1076 | ___.c..........a.__ | 1063 | 63 |
| AM779583.1 | Hepatitis delta virus dTk10 LHD gene for large HD antigen, genomic RN | 1175 | ...........tc...... | 1193 | 89 |
| AM779583.1 | Hepatitis delta virus dTk10 LHD gene for large HD antigen, genomic RN | 990 | _____...........___ | 980 | 57 |
| AM183326.1 | Hepatitis delta virus complete virion genome, strain dFr2600 | 1181 | ..........ctg...... | 1199 | 84 |
| AM183326.1 | Hepatitis delta virus complete virion genome, strain dFr2600 | 1506 | _______..........__ | 1515 | 52 |
| AM183326.1 | Hepatitis delta virus complete virion genome, strain dFr2600 | 1079 | ___.c........._____ | 1069 | 52 |
| AM183326.1 | Hepatitis delta virus complete virion genome, strain dFr2600 | 1311 | _........._________ | 1319 | 47 |
| AM779576.1 | Hepatitis delta virus dFr2544 LHD gene for large HD antigen, genomic | 1167 | ..........ctc...... | 1185 | 84 |
| AM779576.1 | Hepatitis delta virus dFr2544 LHD gene for large HD antigen, genomic | 982 | _____...........___ | 972 | 57 |
| AM779590.1 | Hepatitis delta virus dTk38 LHD gene for large HD antigen, genomic RN | 987 | _____...........c.. | 974 | 68 |
| M84917.1 | HPDCIAA Hepatitis D virus RNA sequence | 986 | _____...........___ | 976 | 57 |
| AY261457.1 | Hepatitis D virus isolate TW2479-12s, complete genome | 1064 | ______...........__ | 1054 | 57 |
| AY261458.1 | Hepatitis D virus isolate TW2479-53, complete genome | 1064 | ______...........__ | 1054 | 57 |
| AY261459.1 | Hepatitis D virus isolate TW2479-13, complete genome | 1066 | ______...........__ | 1056 | 57 |
| AY261460.1 | Hepatitis D virus isolate TW2479-18, complete genome | 1064 | ______...........__ | 1054 | 57 |
| AB118846.1 | Hepatitis delta virus DNA, complete genome, strain:Miyako(JA-M37) | 1065 | ______...........__ | 1055 | 57 |
| AM902165.1 | Hepatitis delta virus dFr2172 LHD gene for large HD antigen, genomic | 988 | _____...........___ | 978 | 57 |
| AM902165.1 | Hepatitis delta virus dFr2172 LHD gene for large HD antigen, genomic | 1238 | .........__________ | 1246 | 47 |
| GU177114.1 | Hepatitis delta virus isolate HDV-DN79, complete genome | 116 | ________........... | 106 | 57 |
| AM902167.1 | Hepatitis delta virus dFr2201 LHD gene for large HD antigen, genomic | 999 | _.........c.ga..c.. | 982 | 73 |
| AM902167.1 | Hepatitis delta virus dFr2201 LHD gene for large HD antigen, genomic | 108 | ____.........______ | 100 | 47 |
| AM183329.1 | Hepatitis delta virus complete virion genome, strain dFr2627 | 185 | .........a.t.._____ | 172 | 63 |
| AM183329.1 | Hepatitis delta virus complete virion genome, strain dFr2627 | 1410 | .c.........________ | 1420 | 52 |
| AM183329.1 | Hepatitis delta virus complete virion genome, strain dFr2627 | 80 | ____.........______ | 72 | 47 |
| AY633627.1 | Hepatitis delta virus isolate IR-1, complete genome | 982 | ______..........___ | 973 | 52 |
| AY633627.1 | Hepatitis delta virus isolate IR-1, complete genome | 191 | ______.........____ | 183 | 47 |
| AM183331.1 | Hepatitis delta virus complete virion genome, strain dFr2005 | 1501 | _______..........__ | 1510 | 52 |
| AM183331.1 | Hepatitis delta virus complete virion genome, strain dFr2005 | 1074 | ___.c........._____ | 1064 | 52 |
| EF514903.1 | Hepatitis delta virus isolate CB, complete genome | 982 | ______..........___ | 973 | 52 |
| EF514907.1 | Hepatitis delta virus isolate ZA, complete genome | 982 | ______..........___ | 973 | 52 |
| EF514905.2 | Hepatitis delta virus isolate OA, complete genome | 982 | ______..........___ | 973 | 52 |
| AM779580.1 | Hepatitis delta virus dFr2046 LHD gene for large HD antigen, genomic | 989 | ______..........___ | 980 | 52 |
| AM779593.1 | Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN | 981 | ______..........___ | 972 | 52 |
| AM779593.1 | Hepatitis delta virus dTk13 LHD gene for large HD antigen, genomic RN | 188 | ______.........____ | 180 | 47 |
| AM902176.1 | Hepatitis delta virus dFr2411 LHD gene for large HD antigen, genomic | 987 | ______..........___ | 978 | 52 |
| AM902179.1 | Hepatitis delta virus dFr2042 LHD gene for large HD antigen, genomic | 987 | _____........m..___ | 977 | 52 |
| AM902179.1 | Hepatitis delta virus dFr2042 LHD gene for large HD antigen, genomic | 1237 | .........__________ | 1245 | 47 |
| AJ584847.1 | Hepatitis D virus mRNA for Large HD antigen (LHD gene), strain dFr-48 | 1416 | .c.........________ | 1426 | 52 |
| AM902181.1 | Hepatitis delta virus dFr2210 LHD gene for large HD antigen, genomic | 172 | .........a.________ | 162 | 52 |
| U81988.1 | HDU81988 Hepatitis delta virus from Somalia genotype IC, complete geno | 803 | _________........._ | 795 | 47 |